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Updated Jan 08, 2024

The Best HR Software for Nonprofits

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Skye Schooley, Business Operations Insider and Senior Lead Analyst
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This guide was reviewed by a Business News Daily editor to ensure it provides comprehensive and accurate information to aid your buying decision.
Best for Risk Management
  • Unlimited HR support
  • In-depth HR audits
  • Written policy creation
Visit Site
Links to Bambee HR Software
  • Unlimited HR support
  • In-depth HR audits
  • Written policy creation
Best for Payroll
  • Contractor and employee payments
  • Fundraiser tracking
  • Automated tax filing
Visit Site
Links to Gusto HR Software
  • Contractor and employee payments
  • Fundraiser tracking
  • Automated tax filing
Best for Reporting and Analytics
  • Advanced analytics tools
  • Customizable reporting features
  • User-friendly platform
Visit Site
Links to Paycor
  • Advanced analytics tools
  • Customizable reporting features
  • User-friendly platform
Best for Employee Onboarding
  • Automated employee onboarding
  • Device and app management
  • Helpful customer support
Visit Site
Links to Rippling HR Software
  • Automated employee onboarding
  • Device and app management
  • Helpful customer support
Best for Remote Teams
Paychex Flex HR Software
Paychex company logo
  • Digital employee onboarding
  • User-friendly mobile apps
  • Payroll tax automation
Links to Paychex Flex HR Software
  • Digital employee onboarding
  • User-friendly mobile apps
  • Payroll tax automation

Table of Contents

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Nonprofit organizations have unique human resources (HR) requirements, but the best HR software can cater to these needs, streamlining functions such as employee and volunteer recruitment and onboarding, time tracking, payroll processing, benefits management, performance management and legal compliance. To help you choose the best HR software for your nonprofit, we examined the top HR platforms on the market, evaluating each one on pricing, usability, features and support.

Compare Our Best Picks

BND Ribbon
Our Top Picks for 2024
Bambee HR Software
Gusto HR Software
Rippling HR Software
Paychex Flex HR Software
Rating9.2/109.7/109.0/109.6/109.4/10
Best for

Risk Management

Payroll

Reporting and analytics

Employee onboarding

Remote teams

Free trial

No

No

Yes

No

No

Monthly base fee

Yes, starting at $99

Yes, starting at $40

Yes, starting at $99

No

Yes, starting at $39

Payroll included

Optional add-on

Included

Optional add-on

Optional add-on

Optional add-on

Integrations

N/A

185+

215+

500+

235+

Mobile app

No

Yes, iOS and Android

Yes, iOS and Android

Yes, iOS and Android

Yes, iOS and Android

Customer service

Dedicated HR manager, phone, email, live chat

Phone, email, live chat

Dedicated support, phone, email, live chat

Email and live chat (optional phone support add-on)

Phone, live chat

Review Link
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Our Reviews

Bambee HR Software: Best HR Software for Risk Management

  • Bambee can cater its HR plans to nonprofits, offering customized policies.
  • The vendor’s experienced HR managers provide unbiased guidance and coaching.
  • Setup fees range from $500 to $3,500, which can make implementation expensive for nonprofits.
Editor's Rating: 9.2/10
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If you run a small nonprofit that needs assistance with risk management, Bambee may be the HR solution for you. The company serves businesses with fewer than 500 employees, and it can cater its services specifically to religious, charitable, educational and agricultural nonprofit organizations. Nonprofits often have multiple types of workers, and each comes with its own set of risks and regulations. Bambee can help your group keep everything straight by providing tailored compliance assistance for diverse teams (e.g., full-time, part-time, temporary, exempt, nonexempt, interns, contractors, leased, seasonal). We like that the vendor offers a guided payroll platform so you can ensure you’re paying workers accurately and on time.

Your company will be paired with a dedicated HR manager who can conduct an HR audit on your organization’s human resources processes to identify areas for improvement. From there, they can help create custom policies that match your industry, location, relevant labor laws and company culture. This hands-on assistance is a great way to ensure you can stay true to your nonprofit’s mission and goals while mitigating potential HR risks.

Gusto HR Software: Best HR Software for Payroll

  • You can automate payroll, thereby saving countless hours.
  • You can pay employees and contractors throughout all 50 states.
  • The vendor charges a monthly base fee, plus a monthly per-employee fee.
Editor's Rating: 9.7/10
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Gusto’s HR software offers a comprehensive solution to streamline payroll processes for nonprofits, helping you efficiently manage your team while staying compliant with various regulations. Nonprofits often have diverse workforces, including employees, volunteers and contractors. Gusto’s platform simplifies the payroll process by allowing these organizations to easily categorize and manage different types of workers, thereby ensuring accurate compensation and tax treatment. We also like that Gusto can automatically file and submit your payroll tax payments on your behalf.

Gusto’s HR software has robust reporting capabilities that can be particularly beneficial for nonprofits. Not-for-profit companies often need to provide detailed financial reports to donors, grantors and regulatory agencies to demonstrate transparency and accountability. Gusto allows organizations to generate custom reports, including payroll summaries and tax documents, with just a few clicks. This feature not only saves valuable time but also ensures accuracy in reporting, thus reducing the risk of errors that can lead to compliance issues.

Paycor: Best HR Software for Reporting and Analytics

  • Paycor has a hands-on implementation process to help nonprofits get up and running with the software.
  • The platform’s analytics and reporting features can help nonprofits identify where they are overspending.
  • Paycor can be expensive for some small organizations.
Editor's Rating: 9/10
Visit Site

Paycor HR software provides nonprofits with a robust set of reporting and analytics tools, and it has served more than 5,200 nonprofit customers to date. Not-for-profit businesses often require comprehensive reporting capabilities to provide transparency to key stakeholders. Paycor’s software facilitates this by allowing nonprofits to generate customized reports on a wide range of HR metrics (e.g., payroll costs, employee turnover, compliance status and workforce demographics). Additionally, Paycor’s reporting features make it easier for nonprofit leaders to track and evaluate key performance indicators (KPIs), which can help identify areas for improvement.

We like that Paycor offers data visualization tools and dashboards for nonprofit organizations to gain a deeper understanding of their workforce dynamics. This enables them to make strategic decisions about staffing, talent management and resource allocation. For example, nonprofits can use this solution to analyze trends in employee engagement, track the effectiveness of training and development programs, and identify potential compliance risks.

Rippling HR Software: Best HR Software for Employee Onboarding

  • Rippling users can automate many HR processes, including employee onboarding.
  • You can sign up for device management features if you need an easy way to assign and manage company-issued devices for employees or volunteers.
  • You must contact Rippling directly for a custom quote; the company doesn’t list its pricing online.
Editor's Rating: 9.6/10
Visit Site

Rippling HR software is a robust and user-friendly solution that assists nonprofits in streamlining their employee onboarding processes. For nonprofit organizations that often operate with limited resources, Rippling’s platform can be a game changer. It enables nonprofits to automate many aspects of the onboarding process, such as paperwork and compliance documentation, thereby reducing administrative burdens and allowing staff to focus on their mission-driven work. Rippling can seamlessly collect and store employee information in one centralized location to ensure compliance with labor laws and regulations.

We also like that Rippling simplifies the process of setting up access to various tools and systems for new hires. This is particularly valuable for nonprofits that rely on multiple software platforms and applications for their day-to-day operations. By integrating with more than 500 third-party programs, Rippling lets nonprofits manage user accounts and permissions with ease. This means new hires can quickly gain access to essential tools, which, in turn, boosts productivity and reduces downtime during the onboarding process.

Paychex Flex HR Software: Best HR Software for Remote Teams

Paychex Flex HR Software
Paychex company logo
  • Users can easily access Paychex from desktop and mobile devices.
  • Paychex offers real-time analytics to help track your workforce.
  • You must contact Paychex directly for a custom price quote, as the company doesn’t provide all of its pricing online.
Editor's Rating: 9.4/10

As remote work has become increasingly prevalent, nonprofits have had to adapt to a new normal. Paychex HR software includes valuable features and support for nonprofits that manage remote workers. This program helps nonprofit organizations effectively manage distributed employees by providing tools for tracking time and attendance, running payroll and ensuring compliance, all within a secure and user-friendly online platform. This is particularly useful for nonprofits that have a geographically dispersed workforce or rely on volunteers and contractors who may work remotely. Paychex enables nonprofits to maintain accurate records of remote-work hours and compensation, thereby ensuring team members are paid correctly and in compliance with labor laws.

Paychex’s HR software also offers remote access to HR resources and employee self-service portals, which can be invaluable for nonprofits with remote teams. We like that remote workers can access important HR documents, update their personal information and request time off, all from their own desktop and mobile devices. This convenience enhances the employee experience and reduces administrative work for HR staff.

HR Software Costs for Nonprofits

The cost of HR software for nonprofits can vary depending on the size of the organization, the features required and the vendor chosen. For example, smaller nonprofits with fewer employees and simpler HR needs may find cost-effective solutions that offer basic human resources functionalities for a lower price. These may include features such as employee record management, time tracking and basic payroll processing.

On the other hand, larger nonprofits with more extensive workforces and complex human resources requirements may need robust HR software that includes advanced features such as talent management, benefits administration and compliance tools, which typically come with a higher price tag.

Here are a few things to keep in mind when you’re budgeting for HR software:

  • Base subscription fees: Most HR software vendors charge a base subscription fee, which covers the cost of using the software platform. Base subscription fees can range from $25 to $200 per month, depending on the vendor and the level of service.
  • Per-employee fees: Many HR software providers also charge a per-employee fee, which covers the cost of supporting each individual employee using the software. Per-employee fees can range from $5 to $20 per employee per month.
  • Add-on fees: Some HR software companies charge additional fees for certain features, such as payroll processing, time tracking and performance management. These expenses can vary depending on the vendor and the specific add-on function. While setup fees are somewhat uncommon for HR software platforms, they typically range between $50 and $200 for standard software implementation (if applicable).

Nonprofit leaders should carefully assess their specific needs and budget constraints to select an HR software solution that aligns with their organization’s financial resources while meeting their human resources management requirements.

Did You Know?Did you know
Nonprofits often face unique budget constraints. Fortunately, some HR software providers offer not-for-profit businesses special pricing or discounts to make their solutions more accessible and affordable. Be sure to ask about nonprofit pricing when you contact a vendor about a specific platform.

HR Software Features for Nonprofits

HR software has a wide range of potential features, many of which are useful for managing nonprofit workforces. Although the specific functions you can access will depend on your HR vendor and software package, here are some of the most popular features to consider.

Hiring and Onboarding

Unlike for-profit organizations that may hire just one type of worker (e.g., full-time employees), nonprofits tend to enlist multiple types of team members, such as full- and part-time employees, contractors and volunteers. HR software can cater to diverse recruitment needs by automating job postings across various online platforms and managing applicant data efficiently. This not only saves time but also widens the reach of job postings, helping nonprofits attract a broader pool of candidates. The software can also facilitate applicant tracking, which makes it easier to identify the most qualified individuals.

When it comes to onboarding new hires, HR software can significantly enhance the experience for employees and volunteers. It enables nonprofits to digitize and standardize the onboarding process to ensure that all necessary forms, documents and training materials are readily available for each new worker. This reduces paperwork and minimizes the chances of errors or omissions. Because HR systems usually include tools for task assignment and tracking, it’s easy for HR managers and supervisors to monitor the progress of new employees and volunteers as they complete their onboarding and training tasks.

FYIDid you know
A poor onboarding process can cost your organization time and money. Conversely, a well-strategized, automated onboarding process can save time and reduce errors.

Time Tracking and Payroll

Because nonprofits often have a range of worker types, they typically deal with varying schedules and pay rates. HR software can help with this by allowing you to create various schedules and digitally track workers’ attendance. Whether your workers are salaried, hourly or paid on a project basis, these platforms can automatically calculate their pay so you can compensate each person accurately and on time. You often have the choice of payment type, such as checks, direct deposit or pay cards.

HR software can automatically calculate and file local, state and federal payroll taxes on your behalf, which can be particularly complex for nonprofits with varying tax-exempt statuses. This automation saves time, reduces administrative burdens, and enhances financial transparency and accountability, all of which are critical for nonprofit organizations that often rely on donor funding and grants, where accurate financial reporting is paramount. [Read related article: How to Run Payroll for a Nonprofit Organization]

Benefits Management

The benefits administration capabilities built into HR software enables nonprofits to offer their staff competitive benefits packages, which can be a key factor in attracting and retaining top talent. This can be especially crucial in the competitive nonprofit sector, where mission-driven work often must be complemented by attractive employment benefits.

With HR software, nonprofits can easily configure and administer a range of benefit plans, including health insurance, retirement contributions and leave policies. This centralized approach streamlines the enrollment and management process for both employees and HR professionals, thereby reducing administrative complexities. Additionally, HR software can automate benefits-related tasks, such as premium deductions and contribution tracking, to ensure accuracy and compliance with applicable laws and regulations.

Performance Management

Nonprofit employers can use HR software to set clear employee performance expectations and goals, aligning each team member’s work with the organization’s mission. Users can create regular performance review cycles and automate the process of gathering feedback from managers and peers. This approach ensures performance evaluations are conducted consistently and transparently and allows for fair assessments and constructive feedback. [Read next: Employees Are More Likely to Consider Quitting After an Unfair Performance Review]

Compliance and Reporting

Nonprofit organizations often face complex legal obligations related to employment law, tax regulations and industry-specific mandates. HR software can help not-for-profit companies navigate these challenges by automating compliance tasks. This reduces the risk of costly legal issues, fines or penalties that could divert resources away from the group’s core mission.

HR software can also streamline the reporting process for nonprofits, making it easier to generate and submit required reports to various government agencies and stakeholders. This is particularly vital for organizations that rely on grants and donations, as they often need to provide detailed financial and HR data to demonstrate transparency and accountability.

Choosing HR Software for Your Nonprofit

When you’re looking for the right HR software for your nonprofit organization, consider these five key factors as you compare solutions: features, pricing, customer support, usability and integrations.

1. Software Features and Scalability

Before you start your HR software search, analyze your current human resources processes to identify what features you need an HR platform to have. Some smaller nonprofits may be able to get away with a basic HR solution, whereas larger organizations will likely need a platform with more robust features. Identify the features you currently need, as well as the ones you may need in the future if your organization grows; ensure that your preferred software can scale with your nonprofit.

2. Pricing and Budget

HR software is an upfront cost that can save you time and money in the long run. However, nonprofits tend to work with pretty limited budgets, so pricing can be a major factor in your decision. Create a budget based on what you can afford. Then, you can look for HR software that’s within that range and has the features you need. Some HR vendors have simple, upfront pricing, while others may require you to pay for various add-ons. Be sure to compare costs based on all the features you will actually be paying for.

3. Customer Support

Customer support at HR software services can run the gamut. Some companies offer basic email and chat assistance during business hours, while others provide dedicated account representatives and phone support. Sometimes the level of support you get even depends on which plan you choose. Determine how important customer service is to your organization and when and how you may want to seek assistance, and look for a solution that satisfies those needs. It can be helpful to read reviews to see past and current users’ experiences with the vendor.

4. Software Usability

Your HR software is only valuable if your employees understand how to use it. We found all of our top picks to be relatively user-friendly, but they vary in complexity. For example, some platforms provide a more basic and intuitive experience, whereas highly customizable programs have a steeper learning curve. Whether you sign up for a free trial or try out an interactive product demo, it’s always a good idea to test the usability of the software before you commit to a contract. When you evaluate the user interface and navigability, consider the skill level of the people who will be using it. Will they find this solution difficult or easy to manage?

5. Integrations

If your nonprofit relies on other business software, like accounting software or time-tracking programs, you will likely want your HR software to integrate with those applications to create one seamless employee management experience. Most of the HR software we looked at can integrate with hundreds of popular platforms, but it’s always wise to check whether the software will work with the other programs you use.

TipTip
Once you’ve narrowed down your search to a few HR vendors, seek feedback from other nonprofits that already use each company’s services. Their insights can help you decide which platform is right for your organization.

Advantages of HR Software for Nonprofits

Manual HR processes can cost your nonprofit valuable time and money and increase the potential for errors. HR software can help you avoid these issues and streamline your human resources operations in many ways.

Here are the top five advantages of HR software for nonprofits:

  1. Increased productivity: HR software automates ordinarily time-consuming human resources tasks, such as payroll processing, benefits administration and compliance tracking. This efficiency frees up HR staff to focus on strategic initiatives and mission-critical activities, which are essential for nonprofits.
  2. Accurate compliance management: Nonprofits must navigate complex labor laws and regulations. HR software helps not-for-profit companies stay compliant by automating tax calculations, tracking regulatory changes and generating the reports necessary for audits, thereby reducing the risk of legal issues and fines.
  3. Improved recruitment and talent management: HR software streamlines your recruitment process, making it easier to attract and hire top talent. It also supports talent management through performance evaluations, training tracking and development planning to ensure that nonprofits have the right skills across their workforce.
  4. Data-driven decision-making: HR software provides valuable insights through reporting and analytics tools that enable nonprofits to make informed decisions about their workforce by identifying trends, addressing issues and optimizing HR strategies.
  5. Employee engagement and self-service: Many HR software solutions offer self-service portals for employees to access their information, request time off and update personal details whether they’re in the office or on the go. This convenience empowers team members, improves engagement and reduces administrative tasks for HR staff.

These advantages collectively enhance nonprofit operations, thus ensuring that not-for-profit business leaders can allocate resources efficiently, maintain compliance, hire and retain talent, and, ultimately, focus on their core mission.

Nonprofit HR Software FAQs

Yes, HR software can be used for volunteers. These programs can be particularly helpful for HR functions such as volunteer recruitment, onboarding and training, project tracking and conflict management. Certain features can also help you maintain compliance with federal and state laws.

Implementing HR software for nonprofit organizations is the same as implementing it for a for-profit organization. You start by choosing a vendor and software platform, and then schedule a meeting with a company sales representative to determine which specific plan and features you want.

The rest of the implementation process will vary based on the provider. Some companies offer a hands-off approach in which you go through most of the implementation on your own, whereas others can set up the program for you. Most of the top vendors have employee self-service features so your workers can input their own information.

It can take days, weeks or even months to get fully implemented and running with HR software. The time frame depends largely on the size of your nonprofit and your HR solution’s customizations.

If you are a small nonprofit with just a few employees or volunteers, you may be able to handle your HR processes manually. However, this will likely change as you hire more workers and there is more to manage. Once you feel your HR processes are taking up too much of your time, it’s probably a good idea to start looking into HR software. Additionally, if you need to streamline HR functions for accuracy or compliance reasons, you’ll likely want to start using HR software.

No, most small nonprofits don’t have entire HR departments. However, some employ a single HR representative to oversee their human resources responsibilities. Because human resources encompasses such a wide range of tasks, HR software can be a big help for nonprofit HR professionals. [Find out when it’s time to hire an HR person.]

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Skye Schooley, Business Operations Insider and Senior Lead Analyst
Skye Schooley is a business expert with a passion for all things human resources and digital marketing. She's spent 10 years working with clients on employee recruitment and customer acquisition, ensuring companies and small business owners are equipped with the information they need to find the right talent and market their services. In recent years, Schooley has largely focused on analyzing HR software products and other human resources solutions to lead businesses to the right tools for managing personnel responsibilities and maintaining strong company cultures. Schooley, who holds a degree in business communications, excels at breaking down complex topics into reader-friendly guides and enjoys interviewing business consultants for new insights. Her work has appeared in a variety of formats, including long-form videos, YouTube Shorts and newsletter segments.
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